Seed Size, Fecundity and Postfire Regeneration Strategy Are Interdependent in Hakea
Journal Article

Seed size is a key functional trait that affects plant fitness at the seedling stage and may

vary greatly with species fruit size, growth form and fecundity. Using structural equation

modelling (SEM) and correlated trait evolution analysis, we investigated the interaction network

between seed size and fecundity, postfire regeneration strategy, fruit size, plant height

and serotiny (on-plant seed storage) among 82 species of the woody shrub genus, Hakea,

with a wide spectrum of seed sizes (2–500 mg). Seed size is negatively correlated with fecundity,

while fire-killed species (nonsprouters) produce more seeds than resprouters

though they are of similar size. Seed size is unrelated to plant height and level of serotiny

while it scales allometrically with fruit size. A strong phylogenetic signal in seed size revealed

phylogenetic constraints on seed size variation in Hakea. Our analyses suggest a

causal relationship between seed size, fecundity and postfire regeneration strategy in

Hakea. These results demonstrate that fruit size, fecundity and evolutionary history have

had most control over seed size variation among Hakea species.

Shhoob Mohamed imhmed Elahmir, (06-2015), UNITED STATES: journal.pone, 1 (1371), 1-12

Cyclic AMP effectors in African trypanosomes revealed by genome-scale RNA Interference library screening for resistance to the phosphodiesterase inhibitor Cpd A
Journal Article

One of the most promising new targets for trypanocidal drugs to emerge in recent years is the cyclic AMP (cAMP) phosphodiesterase (PDE) activity encoded by TbrPDEB1 and TbrPDEB2. These genes were genetically confirmed as essential, and a highaffinity inhibitor, CpdA, displays potent antitrypanosomal activity. To identify effectors of the elevated cAMP levels resulting from CpdA action and, consequently, potential sites for adaptations giving resistance to PDE inhibitors, resistance to the drug was induced. Selection of mutagenized trypanosomes resulted in resistance to CpdA as well as cross-resistance to membranepermeable cAMP analogues but not to currently used trypanocidal drugs. Resistance was not due to changes in cAMP levels or in PDEB genes. A second approach, a genome-wide RNA interference (RNAi) library screen, returned four genes giving resistance to CpdA upon knockdown. Validation by independent RNAi strategies confirmed resistance to CpdA and suggested a role for the identified cAMP Response Proteins (CARPs) in cAMP action. CARP1 is unique to kinetoplastid parasites and has predicted cyclic nucleotide binding-like domains, and RNAi repression resulted in >100-fold resistance. CARP2 and CARP4 are hypothetical conserved proteins associated with the eukaryotic flagellar proteome or with flagellar function, with an orthologue of CARP4 implicated in human disease. CARP3 is a hypothetical protein, unique to Trypanosoma. CARP1 to CARP4 likely represent components of a novel cAMP signaling pathway in the parasite. As cAMP metabolism is validated as a drug target in Trypanosoma brucei, cAMP effectors highly divergent from the mammalian host, such as CARP1, lend themselves to further pharmacological development

Juma Ahmed Mohamed Ali, (10-2013), United States of America: Antimicrobial agents and chemotherapy, 10 (57), 4882-4893

Pyrimidine biosynthesis is not an essential function for Trypanosoma brucei bloodstream forms
Journal Article

Background: African trypanosomes are capable of both pyrimidine biosynthesis and salvage of preformed pyrimidines from the host, but it is unknown whether either process is essential to the parasite. Methodology/Principal Findings: Pyrimidine requirements for growth were investigated using strictly pyrimidine-free media, with or without single added pyrimidine sources. Growth rates of wild-type bloodstream form Trypanosoma brucei brucei were unchanged in pyrimidine-free medium. The essentiality of the de novo pyrimidine biosynthesis pathway was studied by knocking out the PYR6-5 locus that produces a fusion product of orotate phosphoribosyltransferase (OPRT) and Orotidine Monophosphate Decarboxylase (OMPDCase). The pyrimidine auxotroph was dependent on a suitable extracellular pyrimidine source. Pyrimidine starvation was rapidly lethal and non-reversible, causing incomplete DNA content in new cells. The phenotype could be rescued by addition of uracil; supplementation with uridine, 29deoxyuridine, and cytidine allowed a diminished growth rate and density. PYR6-52/ 2 trypanosomes were more sensitive to pyrimidine antimetabolites and displayed increased uracil transport rates and uridine phosphorylase activity. Pyrimidine auxotrophs were able to infect mice although the infection developed much more slowly than infection with the parental, prototrophic trypanosome line. Conclusions/Significance: Pyrimidine salvage was not an essential function for bloodstream T. b. brucei. However, trypanosomes lacking de novo pyrimidine biosynthesis are completely dependent on an extracellular pyrimidine source, strongly preferring uracil, and display reduced infectivity. As T. brucei are able to salvage sufficient pyrimidines from the host environment, the py

Juma Ahmed Mohamed Ali, (03-2013), United States of America: Plos one, 3 (8), 32767-32767

Pyrimidine salvage in Trypanosoma brucei bloodstream forms and the trypanocidal action of halogenated pyrimidines
Journal Article

African trypanosomes are capable of both pyrimidine biosynthesis and salvage of preformed pyrimidines from the host. However, uptake of pyrimidines in bloodstream form trypanosomes has not been investigated, making it difficult to judge the relative importance of salvage and synthesis or to design a pyrimidine-based chemotherapy. Detailed characterization of pyrimidine transport activities in bloodstream form Trypanosoma brucei brucei found that these cells express a high-affinity uracil transporter (designated TbU3) that is clearly distinct from the procyclic pyrimidine transporters. This transporter had low affinity for uridine and 2′deoxyuridine and was the sole pyrimidine transporter expressed in these cells. In addition, thymidine was taken up inefficiently through a P1-type nucleoside transporter. Of importance, the anticancer drug 5-fluorouracil was an excellent substrate for TbU3, and several 5-fluoropyrimidine analogs were investigated for uptake and trypanocidal activity; 5F-orotic acid, 5F-2′deoxyuridine displayed activity in the low micromolar range. The metabolism and mode of action of these analogs was determined using metabolomic assessments of T. brucei clonal lines adapted to high levels of these pyrimidine analogs, and of the sensitive parental strains. The analysis showed that 5-fluorouracil is incorporated into a large number of metabolites but likely exerts toxicity through incorporation into RNA. 5F-2′dUrd and 5F-2′dCtd are not incorporated into nucleic acids but act as prodrugs by inhibiting thymidylate synthase as 5F-dUMP. We present the most complete model of pyrimidine salvage in T. brucei to date, supported by genome-wide profiling of the predicted pyrimidine biosynthesis and conversion enzymes.

Juma Ahmed Mohamed Ali, (02-2013), United States of America: Molecular pharmacology, 2 (28), 439-453

Synthesis of marine Derived 3-alkylpyridinium alkaloids with potent antiprotozoal activity
Journal Article

Given the pressing need for new antiprotozoal drugs without cross-resistance with current (failing) chemotherapy, we have explored 3-tridecylpyridinium alkaloids (3TPAs), derivatives of viscosamine, as antiparasitic agents. We have developed a simple synthetic route toward viscosamine and related cyclic and linear monomers and oligomers. Evaluation for cytotoxicity on the protozoan parasites Trypanosoma brucei, Leishmania spp., and Plasmodium falciparum revealed several 3TPAs with antiprotozoal activity in the nanomolar range. Their promising selectivity index in vitro prompted us to study the dynamics of cytotoxicity on trypanosomes in more detail. Parasites were killed relatively slowly at therapeutically safe concentrations, in a process that did not target the cell cycle. Clearance of T. brucei cultures was observed at drug concentrations of 1–10 μM.

Juma Ahmed Mohamed Ali, (10-2011), United States of America: American Chemical Society medicinal chemistry letters Medicinal chemistry letters, 12 (2), 901-906

تصنيف النباتات المذكورة بالقران الكريم
مقال في مؤتمر علمي

تم تصنيف الانواع النباتية التي تم دكرها في القران الكريم

شهوب محممد أمحمد الأحمر، (09-2009)، ليبيا: المؤثمر الثالث للعلوم الانسنية، 19-22

Attempt to bridge the digital divide in rural areas In Gharian.
Conference paper

Information Communication Technologies (ICTs) provide an opportunity to meet the growing needs of rural areas. Many of the key features of ICT can be used to provide information and the requirements of people in rural areas. The digital divide considered is an important problem that countries face and it is much more complex than simply building out telecommunication networks and infrastructure. The divide is the result of a wide range of social factors, including but not limited to economy factors, education, literacy. Telecommunication infrastructure alone will not guarantee that users will be able to access and take advantage of services on the network. The paper begins with an introduction to the digital divide, and thus to highlight several successful initiatives provided by educational institutions and governmental organizations in Libya in the adoption of ICT. Finally, the paper provides some of the solutions proposed to reduce this divide.


Naser A. Abourawe, Tarik M. ALARBI, Mostafa Ahmed Alksher, Abdulkarim B. Shalool, (04-2009), ليبيا: المؤتمر العلمي الأول للعلوم الأساسية,

حصر النباتات الزهرية بالجزء الشمالي من غريان
مقال في مجلة علمية

تم حصر 375 ننوع نباتي ، وإضافة خمسة انواع نباتات للفلورا النباتية، كما تم تحديد النباتات الطبية ، الرعوية و النادرة بالمنطقة

شهوب محممد أمحمد الأحمر، (01-2008)، طرابلس: المجلة الليبية للعلوم، 16 (1)، 196-213

The effect of Ginger on Schistosoma mansoni infected mice
Journal Article

The present study was performed to evaluate the anti-schistosomal activity of the medicinal plant ginger Zingiber officinale. Mice were individually infected with 100 Schistosoma mansoni cercariae. Four weeks post-infection, mice were orally treated with 1200 mg/kg of ginger for ten consecutive days. After the last dose all animals were sacrificed to evaluate the efficacy of ginger in treatment of the infection. The results obtained showed moderate reduction of 16.5% in the worm burden compared with control infected animals. The liver egg count showed a marked reduction of 53.8%. Ginger treatment showed a significant reduction in the size of liver granuloma where a percentage reduction of 66.35 was observed. Ginger treatment was slightly reflected on the liver function at such rate of infection, where an improvement in serum arginase activity was recorded, while no appreciable improvement in hepatic ALT and AST activities, albumin and creatinine contents. In conclusion Z. officinale displayed some degree of anti-schistosomal activity through reducing of the S. mansoni eggs output and the liver granuloma size.

Juma Ahmed Mohamed Ali, (06-2007), Egypt: Delta Journal Science, 31 (1), 1-10

Three plant species are new recored form Libya
Journal Article

تمت إضافة ثلاثة أنواع نباتية للفلورا الليبية هي Ruta montana + Pimpinella cretica + plantago bellardii

Shhoob Mohamed imhmed Elahmir, (02-2007), المانيا: Med-checklist Notulae, Willdenwia, 1 (37), 16-18

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